Sponsors

  • Special Platinum
    bull
  • Platinum
    mellanox  partec
  • Gold
    nvidia
  • Silver
    prace
  • Student Grant
    nsf2

FRIDAY 26th SEPTEMBER

09.30-11.00

ROOM C
WORKSHOP 1
SECOND INTERNATIONAL WORKSHOP ON PARALLELISM IN BIOINFORMATICS
(PBIO 2014)
  • Predicting Protein-Protein Interactions based on Rotation of Proteins in 3D-Space
    Samaneh Aghajanbaglo, Sobhan Moosavi, Maseud Rahgozar and Amir Rahimi.
  • A Hybrid OpenMP and OpenMPI Approach to Geometrical Motif Search in Proteins
    Marco Ferretti, Mirto Musci and Luigi Santangelo.
  • Applying OpenMP-based Parallel Implementations of NSGA-II and SPEA2 to Study Phylogenetic Relationships
    Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez.
  • Feature Selection in High-Dimensional EEG Data by Parallel Multi-objective Optimization
    Dragi Kimovski, Julio Ortega, Andrés Ortiz and Raúl Baños.
09.30-11.00

ROOM D
WORKSHOP 2
MONITORING AND ANALYSIS FOR HIGH PERFORMANCE COMPUTING SYSTEMS PLUS APPLICATIONS (HPCMASPA)
  • Experiences with NVIDIA FERMI and Kepler GPGPU's.
    MP. Romero and N. DeBardeleben
  • Power Monitoring with PAPI for Extreme Scale Architectures and Dataflow-based Programming Models
    H. McCraw, J. Ralph, A. Danalis, and J. Dongarra
  • Monitoring Application Resource Utilization on the Intel PHI Coprocessor
    J. Brandt and A. Gentile
  • Memory Reliability and Performance Degradation: Hunting Rabbits with an Elephant Gun?
    B. Allan
09.30-11.00

POSTER AREA
CONFERENCE POSTERS + STUDENT POSTERS
11.00-11.30 COFFEE BREAK
11.30-13.00

ROOM C
WORKSHOP 1
SECOND INTERNATIONAL WORKSHOP ON PARALLELISM IN BIOINFORMATICS
(PBIO 2014)
  • Smith-Waterman Algorithm on Heterogeneous System: A Case Study
    Enzo Rucci, A. de Giusti, M. Naiouf, G. Botella, C. García and M. Prieto-Matias.
  • High-Performance X-Ray Tomography Reconstruction Algorithm based on Heterogeneous Accelerated Computing Systems
    Estefania Serrano, Guzman Bermejo, Javier Garcia Blas and Jesus Carretero.
  • Anisotropic Nonlinear Diffusion for Filtering 3D Images in Structural Biology on
    GPUs
    Siham Tabik and L. Felipe Romero.
  • Multi-GPU Acceleration of DARTEL (Early Detection of Alzheimer)
    Pedro Valero-Lara, Alfredo Pinelli, Julien Favier and M. Prieto-Matias.
11.30-13.00

ROOM D
WORKSHOP 2
MONITORING AND ANALYSIS FOR HIGH PERFORMANCE COMPUTING SYSTEMS PLUS APPLICATIONS (HPCMASPA)
  • It Takes a Village: Monitoring the Blue Waters Supercomputer
    B. D. Semeraro, R. Sisneros, J. Fullop and G. H. Bauer
  • ProMon: Production-Time Application Monitoring
    H. Sharifi and J. Cook
  • Realtime Monitoring Using Riemann, Syslog-ng and Collectd
    F. Wernli
  • Towards a Better Mousetrap, Well In this Case a Better HPC System Testing Framework
    C. Idler
11.30-13.00
POSTER AREA
CONFERENCE POSTERS + STUDENT POSTERS
13.00-14.30
ARTIGAS ROOM
STUDENT PROGRAM
2 HOT TOPIC COURSES
13.00-14.30 LUNCH
14.30-16.00

ROOM C
WORKSHOP 1
SECOND INTERNATIONAL WORKSHOP ON PARALLELISM IN BIOINFORMATICS (PBIO 2014)
  • Job Scheduling in Hadoop with Shared Input Policy and RAMDISK
    Aprigio Bezerra, Porfídio Hernández, Antonio Espinosa and Juan Carlos Moure.
  • Support for Bioinformatics Applications through Volunteer and Scalable Computing Frameworks
    Felipe Gutierrez, Danilo Azevedo, Marcos Barreto and Rodrigo Zucoloto
  • Evaluating Grasp-based Cloud Dimensioning for Comparative Genomics: a Practical Approach
    Rafaelli Coutinho, Lúcia Drummond, Yuri Frota, Daniel de Oliveira and Kary Ocaña.
  • A Scalable Framework for Large-Scale Analysis of Gene-Gene Interactions
    Moez Ben Haj Hmida and Yahya Slimani.
14.30-16.00

ROOM D
WORKSHOP 2
MONITORING AND ANALYSIS FOR HIGH PERFORMANCE COMPUTING SYSTEMS PLUS APPLICATIONS (HPCMASPA)
  • Methodology and Application of Machine Learning Algorithms To Classify the Performance of High Performance Cluster Components
    C. Idler and P. Romero
  • Demonstrating Improved Application Performance Using Dynamic Monitoring and Task Mapping
    J. Brandt, K. Devine, A. Gentile, and K. Pedretti
  • Multiobjective Optimization Technique Based on Monitoring Information to Increase the Performance of Thread Migration on Multicores
    O. Lorenzo, T. Pena, J. Cabaleiro, J. Pichel and F. Rivera
14.30-16.00
POSTER AREA
CONFERENCE POSTERS + STUDENT POSTERS
16.00-16.30 COFFEE BREAK
16.30-18.00

ROOM D
WORKSHOP 2
ROOM D MONITORING AND ANALYSIS FOR HIGH PERFORMANCE COMPUTING SYSTEMS PLUS APPLICATIONS (HPCMASPA)

Panel Discussion and Question and Answer
Panel Members TBD
16.30-18.00
POSTER AREA
CONFERENCE POSTERS + STUDENT POSTERS